South Atlantic Water Science Center - North Carolina Office
Project OverviewFull Title Location Cooperating Agencies Project Chief Period of Project Team Members Science Topic USGS IN YOUR STATEUSGS Water Science Centers are located in each state. |
Fate and transport of pathogens and nutrients from land-applied animal manuresThis project was completed in 2012. These pages are for historical purposes only. Reports
REFERENCES Barber, L.B., Brown, G.K., and Zaugg, S.D. 2000. Potential endocrine disrupting organic chemicals in treated municipal wastewater and river water: In Analysis of Environmental Endocrine Disruptors; Keith, L.H., Jones-Lepp, T.L., and Needham, L.L., eds.; ACS Symposium Series 747; American Chemical Society: Washington D.C., p. 97-123. Brown, G.K., Zaugg, S.D., and Barber, L.B. 1999. Wastewater analysis by gas chromatography/mass spectrometry: in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 2 of 3--Contamination of Hydrologic Systems and Related Ecosystems: U.S. Geological Survey Water-Resources Investigations Report 99-4018B, p. 431-435. Chen, J., Z. Yu, F.C. Michel, T. Wittum, and M. Morrison. 2007. Development and Application of Real-Time PCR Assays for Quantification of erm Genes Conferring Resistance to Macrolides-Lincosamides-Streptogramin B in Livestock Manure and Manure Management Systems, Appl. Environ. Microbiol., 73(14):4407–4416. Dick, L.K., A.E. Bernhard, T.J. Brodeur, , J.W. Santo Domingo, J.M. Simpson, S.P. Walters, and K.G. Field. 2005. Host Distributions of Uncultivated Fecal Bacteroidales Bacteria Reveal Genetic Markers for Fecal Source Identification, Appl. Environ. Microbiol., 71: 3184-3191. Dick, L.K. and K.G. Field, 2004. Rapid Estimation of Numbers of Fecal Bacteroidetes by Use of a Quantitative PCR Assay for 16S rRNA Genes. Appl. Environ. Microbiol., 70:5695-5697. Fishman, M.J., ed., 1993, Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory – Determination of inorganic and organic constituents in water and fluvial sediments: U.S. Geological Survey Open-File Report 93-125, 217 p. Fishman, M.J., and Friedman, L.C., 1989, Methods for determination of inorganic substances in water and fluvial sediments: U.S. Geological Survey Techniques of Water-Resources Investigations, book 5, chapter A1, 545 p. Gourmelon, M., M.P. Caprais, R. Ségura, C. Le Mennec, S. Lozach, J. Y. Piriou, A. Rincé. 2007. Evaluation of Two Library-Independent Microbial Source Tracking Methods To Identify Sources of Fecal Contamination in French Estuaries, Appl. Environ. Microbiol., 73:4857-4866. Heuvelink, A.E., S.M. Valkenburgh, J.J.H.C. Tilburg, C. Van Heerwaarden, J.T.M. Zwartkruis-Nahuis, and E. de Boer. 2007. Public farms: hygene and zoonotic agents, Epidemiol. Infect., 135:1174-1183. Hirsch, R., T.A. Ternes, K. Haberer, A. Mehlich, F. Ballwanz, and K.L. Kratz. 1998. Determination of antibiotics in different water compartments via liquid chromatography-electrospray tandem mass spectrometry, J. Chromatography A, 518:213-223. Ibekwe, A.M., P.M. Watt, C.M. Grieve, V.K. Sharma, and S.R. Lyons. 2002. Multiplex fluorogenic real-time PCR for detection and quantification of Escherichia coli O157:H7 in dairy wastewater wetlands, Appl. Environ. Microbiol., 68(10):4853-4862. Kolpin, D.W., Furlong, E.T., Meyer, M.T., Thurman, E.M., Zaugg, S.D., Barber, L.B., and Buxton, H.T. 2002. Pharmaceuticals, hormones, and other organic wastewater contaminants in U.S. streams, 1999- 2000: A national reconnaissance, Environ. Sci. Technol., 36(6):1202-1211. Lindsey, M.E., Meyer, M.T., and Thurman, E.M. 2001. Analysis of trace levels of sulfonamide and tetracycline antimicrobials in groundwater and surface water using solid-phase extraction and liquid chromatography/mass spectrometry, Analytical Chemistry, 73:4640-4646. Ludwig, W. and Schleifer, K.H. 2000. How quantitative is quantitative PCR with respect to cell counts? Syst. Appl. Microbiol., 23:556–562. Lund, M., S. Nordentoft, K. Pedersen, and M. Madsen. 2004. Detection of Campylobacter spp. in Chicken Fecal Samples by Real-Time PCR, Journal of Clinical Microbiology, 42(11) 5125–5132. Malorny, B., E. Paccassoni, P. Fach, C. Bunge, A. Martin, and R. Helmuth, 2004. Diagnostic Real-Time PCR for Detection of Salmonella in Food. Appl. Environ. Microbiol. 70(12):7043-7052. Meyer, M.T., Bumgarner, J.E., Varns, J.L., Daughtridge, J.V., Thurman, E.M., and Hostetler, K.A. 2000. Use of radioimmunoassay as a screen for antibiotics in confined animal feeding operations and confirmation by liquid chromatography / mass spectrometry, The Science of the Total Environment, 248:181-187. Mieszkin, S., J.P. Furet, G. Corthier, M. Gourmelon. 2009. Estimation of Pig Fecal Contamination in a River Catchment by Real-Time PCR Using Two Pig-Specific Bacteroidales 16S rRNA Genetic Markers, Appl. Environ. Microbiol., 75: 3045-3054. Patton, C.J., Kryskalla, J.R., 2003, Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory—Evaluation of alkaline persulfate digestion as an alternative to Kjedahl digestion for determination of total and dissolved nitrogen and phosphorus in water: U.S. Geological Survey Water-Resources Investigation Report 03-4174, 33 p. Pei, R., S.C. Kim, K. Carlson, and A. Pruden. 2006. Effect of River Landscape on the sediment concentrations of antibiotics and corresponding antibiotic resistance genes (ARG), Water Research, 40:2427-2435 Smith M.S., R.K. Yang, C.W. Knapp, Y. Niu, N. Peak, M.M. Hanfelt, J.C. Galland, and D.W. Graham .2004. Quantification of Tetracycline Resistance Genes in Feedlot Lagoons by Real-Time PCR, Appl. Environ. Microbiol., 70(12):7372–7377. United States Environmental Protection Agency, 1993, Method 365.1 – Determination of phosphorus by semi-automated colorimetry, Revision 2, Methods for the determination of inorganic substances in environmental samples. Volkmann, H., T. Schwartz, P. Bischoff, S. Kirchen, U. Obst. 2003. Detection of clinically relevant antibiotic-resistance genes in municipal wastewater using real-time PCR (TaqMan), J. Microbiol. Meth., 56:277– 286 |